A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report generated on 2019-01-01, 09:07 based on data in:
/mnt/NAS/NASBIO1/DATA/GAMeR_DB/STAPHYLOCOCCUS
General Statistics
Showing 1244 samples.
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QUAST
QUAST is a quality assessment tool for genome assemblies, written by the Center for Algorithmic Biotechnology.
Assembly Statistics
Showing 311/311 rows and 12/12 columns.
| Sample Name | N50 (Kbp) | N75 (Kbp) | L50 (K) | L75 (K) | Largest contig (Kbp) | Length (Mbp) | Misassemblies | Mismatches/100kbp | Indels/100kbp | Genes | Genes (Partial) | Genome Fraction |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 05CEB01STA_scaffold_closed | 2155.5Kbp | 2155.5Kbp | 0.0K | 1.0K | 2155.5Kbp | 2.8Mbp | 58.0 | 702.57 | 30.97 | 2326 | 45 | 92.8% |
| 05CEB18STA_scaffold_closed | 2726.6Kbp | 2726.6Kbp | 0.0K | 1.0K | 2726.6Kbp | 2.7Mbp | 47.0 | 696.63 | 32.83 | 2547 | 47 | 92.3% |
| 05CEB52STA_scaffold_closed | 2791.9Kbp | 2791.9Kbp | 0.0K | 1.0K | 2791.9Kbp | 2.8Mbp | 53.0 | 786.24 | 35.52 | 2290 | 41 | 91.9% |
| 07CEB132STA_scaffold_closed | 517.5Kbp | 479.1Kbp | 0.0K | 3.0K | 1288.1Kbp | 2.8Mbp | 35.0 | 48.15 | 6.06 | 2596 | 32 | 95.2% |
| 07CEB151STA_scaffold_closed | 2736.1Kbp | 2736.1Kbp | 0.0K | 1.0K | 2736.1Kbp | 2.8Mbp | 36.0 | 294.85 | 13.47 | 2412 | 36 | 93.1% |
| 07CEB153STA_scaffold_closed | 2792.1Kbp | 2792.1Kbp | 0.0K | 1.0K | 2792.1Kbp | 2.8Mbp | 49.0 | 704.88 | 30.51 | 2325 | 48 | 93.2% |
| 07CEB234STA_scaffold_closed | 2760.5Kbp | 2760.5Kbp | 0.0K | 1.0K | 2760.5Kbp | 2.8Mbp | 54.0 | 775.19 | 33.90 | 2280 | 44 | 91.2% |
| 07CEB89STA_scaffold_closed | 2694.3Kbp | 2694.3Kbp | 0.0K | 1.0K | 2694.3Kbp | 2.7Mbp | 61.0 | 759.94 | 31.40 | 2379 | 47 | 92.3% |
| 07CEB90STA_scaffold_closed | 2662.3Kbp | 2662.3Kbp | 0.0K | 1.0K | 2662.3Kbp | 2.7Mbp | 76.0 | 1756.46 | 58.49 | 2248 | 54 | 84.0% |
| 07CEB91STA_scaffold_closed | 2311.3Kbp | 2311.3Kbp | 0.0K | 1.0K | 2311.3Kbp | 2.8Mbp | 35.0 | 58.39 | 6.67 | 2637 | 40 | 94.6% |
| 07CEB93STA_scaffold_closed | 2713.7Kbp | 2713.7Kbp | 0.0K | 1.0K | 2713.7Kbp | 2.7Mbp | 61.0 | 771.71 | 32.62 | 2360 | 50 | 92.0% |
| 07CEB94STA_scaffold_closed | 2776.6Kbp | 2776.6Kbp | 0.0K | 1.0K | 2776.6Kbp | 2.8Mbp | 39.0 | 37.83 | 3.03 | 2497 | 31 | 95.0% |
| 08CEB04STA_scaffold_closed | 2756.6Kbp | 2756.6Kbp | 0.0K | 1.0K | 2756.6Kbp | 2.8Mbp | 35.0 | 43.52 | 4.40 | 2570 | 30 | 94.0% |
| 08CEB10STA_scaffold_closed | 2793.9Kbp | 2793.9Kbp | 0.0K | 1.0K | 2793.9Kbp | 2.8Mbp | 112.0 | 635.25 | 25.61 | 2420 | 117 | 91.8% |
| 08CEB11STA_scaffold_closed | 2739.6Kbp | 2739.6Kbp | 0.0K | 1.0K | 2739.6Kbp | 2.8Mbp | 33.0 | 47.75 | 6.20 | 2599 | 29 | 95.3% |
| 08CEB333STA_scaffold_closed | 2269.8Kbp | 2269.8Kbp | 0.0K | 1.0K | 2269.8Kbp | 2.8Mbp | 33.0 | 47.99 | 6.87 | 2600 | 25 | 95.3% |
| 09CEB04STA_scaffold_closed | 1794.3Kbp | 1002.7Kbp | 0.0K | 2.0K | 1794.3Kbp | 2.8Mbp | 28.0 | 9.30 | 2.76 | 2814 | 30 | 98.8% |
| 09CEB204STA_scaffold_closed | 2195.7Kbp | 2195.7Kbp | 0.0K | 1.0K | 2195.7Kbp | 2.7Mbp | 32.0 | 54.77 | 4.77 | 2368 | 31 | 93.8% |
| 09CEB303STA_scaffold_closed | 2741.7Kbp | 2741.7Kbp | 0.0K | 1.0K | 2741.7Kbp | 2.8Mbp | 32.0 | 46.81 | 6.78 | 2630 | 36 | 94.6% |
| 09CEB314STA_scaffold_closed | 2193.7Kbp | 2193.7Kbp | 0.0K | 1.0K | 2193.7Kbp | 2.8Mbp | 24.0 | 30.23 | 3.62 | 2390 | 22 | 95.4% |
| 09CEB319STA_scaffold_closed | 2287.7Kbp | 2287.7Kbp | 0.0K | 1.0K | 2287.7Kbp | 2.8Mbp | 26.0 | 32.20 | 3.89 | 2391 | 24 | 95.4% |
| 09CEB329STA_scaffold_closed | 2301.0Kbp | 2301.0Kbp | 0.0K | 1.0K | 2301.0Kbp | 2.8Mbp | 25.0 | 31.94 | 4.08 | 2388 | 21 | 95.4% |
| 10CEB282STA_scaffold_closed | 2704.6Kbp | 2704.6Kbp | 0.0K | 1.0K | 2704.6Kbp | 2.7Mbp | 30.0 | 25.32 | 3.18 | 2460 | 22 | 93.9% |
| 10CEB283STA_scaffold_closed | 2789.8Kbp | 2789.8Kbp | 0.0K | 1.0K | 2789.8Kbp | 2.8Mbp | 49.0 | 662.05 | 28.92 | 2557 | 50 | 93.3% |
| 10CEB289STA_scaffold_closed | 2770.2Kbp | 2770.2Kbp | 0.0K | 1.0K | 2770.2Kbp | 2.8Mbp | 70.0 | 739.72 | 30.00 | 2552 | 54 | 93.2% |
| 10CEB304STA_scaffold_closed | 2755.5Kbp | 2755.5Kbp | 0.0K | 1.0K | 2755.5Kbp | 2.8Mbp | 37.0 | 46.98 | 6.96 | 2656 | 29 | 95.2% |
| 10CEB324STA_scaffold_closed | 2740.7Kbp | 2740.7Kbp | 0.0K | 1.0K | 2740.7Kbp | 2.7Mbp | 52.0 | 669.67 | 31.00 | 2548 | 47 | 92.2% |
| 10CEB329STA_scaffold_closed | 2700.4Kbp | 2700.4Kbp | 0.0K | 1.0K | 2700.4Kbp | 2.7Mbp | 59.0 | 778.26 | 33.37 | 2395 | 42 | 93.0% |
| 10CEB376STA_scaffold_closed | 2693.1Kbp | 2693.1Kbp | 0.0K | 1.0K | 2693.1Kbp | 2.7Mbp | 48.0 | 704.18 | 32.73 | 2492 | 51 | 90.8% |
| 10CEB381STA_scaffold_closed | 2201.7Kbp | 2201.7Kbp | 0.0K | 1.0K | 2201.7Kbp | 2.9Mbp | 46.0 | 58.34 | 5.82 | 2650 | 36 | 96.7% |
| 10CEB396STA_scaffold_closed | 1006.4Kbp | 1006.4Kbp | 0.0K | 2.0K | 1503.7Kbp | 3.0Mbp | 45.0 | 107.12 | 7.07 | 2735 | 51 | 97.7% |
| 10CEB401STA_scaffold_closed | 2797.4Kbp | 2797.4Kbp | 0.0K | 1.0K | 2797.4Kbp | 2.8Mbp | 32.0 | 66.64 | 6.38 | 2683 | 39 | 96.1% |
| 10CEB402STA_scaffold_closed | 2797.0Kbp | 2797.0Kbp | 0.0K | 1.0K | 2797.0Kbp | 2.8Mbp | 28.0 | 70.16 | 7.09 | 2683 | 41 | 96.0% |
| 10CEB413STA_scaffold_closed | 2768.3Kbp | 2768.3Kbp | 0.0K | 1.0K | 2768.3Kbp | 2.8Mbp | 36.0 | 64.69 | 8.03 | 2652 | 38 | 94.9% |
| 10CEB418STA_scaffold_closed | 2801.0Kbp | 2801.0Kbp | 0.0K | 1.0K | 2801.0Kbp | 2.8Mbp | 42.0 | 40.03 | 4.43 | 2460 | 25 | 93.9% |
| 10CEB427STA_scaffold_closed | 2606.1Kbp | 2606.1Kbp | 0.0K | 1.0K | 2606.1Kbp | 2.8Mbp | 30.0 | 48.49 | 7.19 | 2651 | 33 | 95.2% |
| 11CEB145STA_scaffold_closed | 2499.6Kbp | 2499.6Kbp | 0.0K | 1.0K | 2499.6Kbp | 2.9Mbp | 32.0 | 42.56 | 4.05 | 2561 | 40 | 97.3% |
| 11CEB272STA_scaffold_closed | 2080.4Kbp | 699.8Kbp | 0.0K | 2.0K | 2080.4Kbp | 2.8Mbp | 40.0 | 45.89 | 5.80 | 2589 | 30 | 94.6% |
| 11CEB273STA_scaffold_closed | 2311.8Kbp | 2311.8Kbp | 0.0K | 1.0K | 2311.8Kbp | 2.8Mbp | 42.0 | 47.25 | 6.32 | 2598 | 27 | 95.2% |
| 11CEB274STA_scaffold_closed | 2615.8Kbp | 2615.8Kbp | 0.0K | 1.0K | 2615.8Kbp | 2.6Mbp | 43.0 | 295.35 | 13.79 | 2361 | 40 | 91.2% |
| 11CEB275STA_scaffold_closed | 2681.7Kbp | 2681.7Kbp | 0.0K | 1.0K | 2681.7Kbp | 2.7Mbp | 40.0 | 297.17 | 14.33 | 2402 | 37 | 93.0% |
| 11CEB276STA_scaffold_closed | 2818.6Kbp | 2818.6Kbp | 0.0K | 1.0K | 2818.6Kbp | 2.8Mbp | 39.0 | 50.83 | 6.73 | 2594 | 32 | 95.2% |
| 11CEB277STA_scaffold_closed | 2742.8Kbp | 2742.8Kbp | 0.0K | 1.0K | 2742.8Kbp | 2.8Mbp | 65.0 | 649.19 | 24.93 | 2491 | 54 | 92.1% |
| 11CEB278STA_scaffold_closed | 2312.6Kbp | 2312.6Kbp | 0.0K | 1.0K | 2312.6Kbp | 2.8Mbp | 38.0 | 55.03 | 6.72 | 2598 | 29 | 95.3% |
| 11CEB279STA_scaffold_closed | 2694.0Kbp | 2694.0Kbp | 0.0K | 1.0K | 2694.0Kbp | 2.7Mbp | 61.0 | 662.63 | 25.25 | 2498 | 49 | 92.1% |
| 11CEB280STA_scaffold_closed | 2686.3Kbp | 2686.3Kbp | 0.0K | 1.0K | 2686.3Kbp | 2.7Mbp | 41.0 | 296.00 | 12.85 | 2410 | 37 | 92.8% |
| 11CEB281STA_scaffold_closed | 2270.1Kbp | 2270.1Kbp | 0.0K | 1.0K | 2270.1Kbp | 2.8Mbp | 38.0 | 45.96 | 5.60 | 2596 | 28 | 95.3% |
| 11CEB282STA_scaffold_closed | 2789.2Kbp | 2789.2Kbp | 0.0K | 1.0K | 2789.2Kbp | 2.8Mbp | 35.0 | 45.85 | 5.23 | 2589 | 30 | 94.6% |
| 11CEB283STA_scaffold_closed | 2664.2Kbp | 2664.2Kbp | 0.0K | 1.0K | 2664.2Kbp | 2.7Mbp | 33.0 | 288.75 | 12.71 | 2408 | 34 | 92.9% |
| 11CEB284STA_scaffold_closed | 1438.5Kbp | 831.2Kbp | 0.0K | 2.0K | 1438.5Kbp | 2.8Mbp | 40.0 | 46.94 | 5.98 | 2597 | 30 | 95.2% |
| 11CEB285STA_scaffold_closed | 2689.1Kbp | 2689.1Kbp | 0.0K | 1.0K | 2689.1Kbp | 2.7Mbp | 43.0 | 297.87 | 13.23 | 2402 | 39 | 92.9% |
| 12CEB107STA_scaffold_closed | 2656.4Kbp | 2656.4Kbp | 0.0K | 1.0K | 2656.4Kbp | 2.8Mbp | 49.0 | 733.22 | 29.36 | 2412 | 52 | 91.4% |
| 12CEB112STA_scaffold_closed | 1920.0Kbp | 599.9Kbp | 0.0K | 2.0K | 1920.0Kbp | 2.7Mbp | 52.0 | 694.23 | 29.77 | 2414 | 47 | 91.4% |
| 12CEB117STA_scaffold_closed | 2718.4Kbp | 2718.4Kbp | 0.0K | 1.0K | 2718.4Kbp | 3.4Mbp | 77.0 | 1727.20 | 57.61 | 2311 | 56 | 85.2% |
| 12CEB137STA_scaffold_closed | 2127.9Kbp | 2127.9Kbp | 0.0K | 1.0K | 2127.9Kbp | 2.7Mbp | 24.0 | 46.03 | 5.46 | 2380 | 27 | 94.6% |
| 12CEB265STA_scaffold_closed | 2743.1Kbp | 2743.1Kbp | 0.0K | 1.0K | 2743.1Kbp | 2.7Mbp | 51.0 | 685.80 | 30.18 | 2527 | 46 | 91.5% |
| 12CEB294STA_scaffold_closed | 2607.7Kbp | 2607.7Kbp | 0.0K | 1.0K | 2607.7Kbp | 2.6Mbp | 28.0 | 47.52 | 7.09 | 2504 | 25 | 90.0% |
| 12CEB299STA_scaffold_closed | 2461.2Kbp | 2461.2Kbp | 0.0K | 1.0K | 2461.2Kbp | 2.7Mbp | 58.0 | 51.82 | 6.89 | 2539 | 57 | 94.0% |
| 12CEB304STA_scaffold_closed | 2126.9Kbp | 2126.9Kbp | 0.0K | 1.0K | 2126.9Kbp | 2.8Mbp | 55.0 | 782.61 | 32.91 | 2292 | 41 | 91.7% |
| 12CEB368STA_scaffold_closed | 2694.3Kbp | 2694.3Kbp | 0.0K | 1.0K | 2694.3Kbp | 2.7Mbp | 85.0 | 36.67 | 14.93 | 2484 | 63 | 95.4% |
| 12CEB428STA_scaffold_closed | 2766.1Kbp | 2766.1Kbp | 0.0K | 1.0K | 2766.1Kbp | 2.8Mbp | 74.0 | 1733.62 | 56.29 | 2296 | 58 | 85.0% |
| 12CEB433STA_scaffold_closed | 2359.7Kbp | 2359.7Kbp | 0.0K | 1.0K | 2359.7Kbp | 2.8Mbp | 38.0 | 21.95 | 3.06 | 2499 | 39 | 95.3% |
| 12CEB445STA_scaffold_closed | 2793.5Kbp | 2793.5Kbp | 0.0K | 1.0K | 2793.5Kbp | 2.8Mbp | 40.0 | 26.56 | 4.35 | 2598 | 25 | 94.2% |
| 12CEB446STA_scaffold_closed | 1960.3Kbp | 716.5Kbp | 0.0K | 2.0K | 1960.3Kbp | 2.7Mbp | 66.0 | 1773.87 | 58.10 | 2241 | 53 | 83.8% |
| 12CEB447STA_scaffold_closed | 2761.9Kbp | 2761.9Kbp | 0.0K | 1.0K | 2761.9Kbp | 2.8Mbp | 55.0 | 724.69 | 29.53 | 2409 | 44 | 91.3% |
| 12CEB456STA_scaffold_closed | 2753.6Kbp | 2753.6Kbp | 0.0K | 1.0K | 2753.6Kbp | 2.8Mbp | 52.0 | 708.38 | 28.99 | 2386 | 47 | 90.4% |
| 12CEB461STA_scaffold_closed | 2065.9Kbp | 688.6Kbp | 0.0K | 2.0K | 2065.9Kbp | 2.8Mbp | 55.0 | 707.89 | 28.14 | 2384 | 46 | 90.5% |
| 12CEB476STA_scaffold_closed | 2743.6Kbp | 2743.6Kbp | 0.0K | 1.0K | 2743.6Kbp | 2.7Mbp | 55.0 | 725.61 | 32.92 | 2538 | 58 | 92.5% |
| 12CEB496STA_scaffold_closed | 2339.4Kbp | 2339.4Kbp | 0.0K | 1.0K | 2339.4Kbp | 2.8Mbp | 58.0 | 718.82 | 33.86 | 2556 | 65 | 92.9% |
| 12CEB507STA_scaffold_closed | 2131.0Kbp | 2131.0Kbp | 0.0K | 1.0K | 2131.0Kbp | 2.7Mbp | 58.0 | 671.62 | 26.44 | 2500 | 47 | 92.0% |
| 12CEB512STA_scaffold_closed | 2254.3Kbp | 2254.3Kbp | 0.0K | 1.0K | 2254.3Kbp | 2.7Mbp | 140.0 | 676.38 | 34.22 | 2424 | 107 | 91.3% |
| 13-319KF_scaffold_closed | 2771.1Kbp | 2771.1Kbp | 0.0K | 1.0K | 2771.1Kbp | 2.8Mbp | 34.0 | 30.31 | 3.57 | 2483 | 29 | 94.6% |
| 13CEB175STA_scaffold_closed | 1598.8Kbp | 1196.4Kbp | 0.0K | 2.0K | 1598.8Kbp | 2.8Mbp | 41.0 | 78.55 | 5.66 | 2696 | 38 | 96.5% |
| 13CEB176STA_scaffold_closed | 2345.9Kbp | 2345.9Kbp | 0.0K | 1.0K | 2345.9Kbp | 2.9Mbp | 36.0 | 13.94 | 2.03 | 2654 | 28 | 96.2% |
| 13CEB177STA_scaffold_closed | 2764.3Kbp | 2764.3Kbp | 0.0K | 1.0K | 2764.3Kbp | 2.8Mbp | 61.0 | 1348.48 | 52.20 | 2248 | 41 | 89.6% |
| 13CEB178STA_scaffold_closed | 2726.5Kbp | 2726.5Kbp | 0.0K | 1.0K | 2726.5Kbp | 2.8Mbp | 32.0 | 39.01 | 3.11 | 2485 | 31 | 94.8% |
| 13CEB179STA_scaffold_closed | 2797.1Kbp | 2797.1Kbp | 0.0K | 1.0K | 2797.1Kbp | 2.8Mbp | 29.0 | 9.72 | 3.10 | 2648 | 31 | 98.1% |
| 13CEB181STA_scaffold_closed | 2855.5Kbp | 2855.5Kbp | 0.0K | 1.0K | 2855.5Kbp | 2.9Mbp | 48.0 | 141.05 | 8.77 | 2619 | 31 | 94.3% |
| 13CEB182STA_scaffold_closed | 2130.4Kbp | 2130.4Kbp | 0.0K | 1.0K | 2130.4Kbp | 2.7Mbp | 26.0 | 33.97 | 4.22 | 2589 | 28 | 97.7% |
| 13CEB184STA_scaffold_closed | 2680.2Kbp | 2680.2Kbp | 0.0K | 1.0K | 2680.2Kbp | 2.7Mbp | 47.0 | 702.12 | 30.42 | 2464 | 46 | 91.6% |
| 13CEB188STA_scaffold_closed | 1844.8Kbp | 909.1Kbp | 0.0K | 2.0K | 1844.8Kbp | 2.8Mbp | 38.0 | 24.57 | 3.17 | 2514 | 29 | 95.3% |
| 13CEB190STA_scaffold_closed | 2707.6Kbp | 2707.6Kbp | 0.0K | 1.0K | 2707.6Kbp | 2.7Mbp | 29.0 | 13.75 | 3.29 | 2634 | 15 | 98.6% |
| 13CEB191STA_scaffold_closed | 2804.0Kbp | 2804.0Kbp | 0.0K | 1.0K | 2804.0Kbp | 2.8Mbp | 29.0 | 60.69 | 4.54 | 2579 | 32 | 95.9% |
| 13CEB193STA_scaffold_closed | 2746.6Kbp | 2746.6Kbp | 0.0K | 1.0K | 2746.6Kbp | 2.8Mbp | 49.0 | 685.51 | 29.97 | 2317 | 47 | 92.8% |
| 13CEB235STA_scaffold_closed | 2213.8Kbp | 2213.8Kbp | 0.0K | 1.0K | 2213.8Kbp | 2.7Mbp | 58.0 | 766.17 | 30.95 | 2393 | 50 | 92.8% |
| 13CEB239STA_scaffold_closed | 2695.2Kbp | 2695.2Kbp | 0.0K | 1.0K | 2695.2Kbp | 2.7Mbp | 46.0 | 711.06 | 27.48 | 2390 | 42 | 90.9% |
| 13CEB243STA_scaffold_closed | 2694.9Kbp | 2694.9Kbp | 0.0K | 1.0K | 2694.9Kbp | 2.7Mbp | 59.0 | 773.34 | 30.83 | 2393 | 48 | 92.8% |
| 13CEB251STA_scaffold_closed | 2814.7Kbp | 2814.7Kbp | 0.0K | 1.0K | 2814.7Kbp | 2.8Mbp | 59.0 | 793.70 | 34.89 | 2302 | 46 | 91.9% |
| 13CEB257STA_scaffold_closed | 2144.1Kbp | 2144.1Kbp | 0.0K | 1.0K | 2144.1Kbp | 2.8Mbp | 58.0 | 796.51 | 34.44 | 2299 | 50 | 91.9% |
| 13CEB307STA_scaffold_closed | 2799.4Kbp | 2799.4Kbp | 0.0K | 1.0K | 2799.4Kbp | 2.8Mbp | 30.0 | 53.73 | 6.94 | 2666 | 38 | 95.5% |
| 13CEB308STA_scaffold_closed | 2763.5Kbp | 2763.5Kbp | 0.0K | 1.0K | 2763.5Kbp | 2.8Mbp | 46.0 | 752.60 | 28.74 | 2437 | 45 | 92.2% |
| 13CEB309STA_scaffold_closed | 2761.9Kbp | 2761.9Kbp | 0.0K | 1.0K | 2761.9Kbp | 2.8Mbp | 51.0 | 749.93 | 27.98 | 2436 | 47 | 92.2% |
| 13CEB310STA_scaffold_closed | 2788.6Kbp | 2788.6Kbp | 0.0K | 1.0K | 2788.6Kbp | 2.8Mbp | 36.0 | 58.55 | 7.69 | 2666 | 42 | 95.5% |
| 13CEB311STA_scaffold_closed | 1885.7Kbp | 893.1Kbp | 0.0K | 2.0K | 1885.7Kbp | 2.8Mbp | 65.0 | 708.06 | 29.51 | 2568 | 55 | 93.7% |
| 13CEB312STA_scaffold_closed | 2781.5Kbp | 2781.5Kbp | 0.0K | 1.0K | 2781.5Kbp | 2.8Mbp | 82.0 | 1807.85 | 69.01 | 2358 | 64 | 84.1% |
| 13CEB313STA_scaffold_closed | 2779.7Kbp | 2779.7Kbp | 0.0K | 1.0K | 2779.7Kbp | 2.8Mbp | 82.0 | 1805.29 | 69.33 | 2356 | 64 | 84.0% |
| 13CEB314STA_scaffold_closed | 2797.6Kbp | 2797.6Kbp | 0.0K | 1.0K | 2797.6Kbp | 2.8Mbp | 45.0 | 26.30 | 4.12 | 2607 | 33 | 94.6% |
| 13CEB315STA_scaffold_closed | 2836.9Kbp | 2836.9Kbp | 0.0K | 1.0K | 2836.9Kbp | 2.9Mbp | 43.0 | 26.49 | 3.93 | 2606 | 33 | 94.7% |
| 13CEB316STA_scaffold_closed | 2358.6Kbp | 2358.6Kbp | 0.0K | 1.0K | 2358.6Kbp | 2.8Mbp | 43.0 | 24.42 | 3.90 | 2606 | 32 | 94.5% |
| 13CEB317STA_scaffold_closed | 2782.8Kbp | 2782.8Kbp | 0.0K | 1.0K | 2782.8Kbp | 2.8Mbp | 79.0 | 1807.21 | 69.25 | 2354 | 66 | 84.0% |
| 13CEB318STA_scaffold_closed | 2777.3Kbp | 2777.3Kbp | 0.0K | 1.0K | 2777.3Kbp | 2.8Mbp | 82.0 | 1781.30 | 68.52 | 2355 | 67 | 84.0% |
| 13CEB319STA_scaffold_closed | 2769.7Kbp | 2769.7Kbp | 0.0K | 1.0K | 2769.7Kbp | 2.8Mbp | 34.0 | 29.45 | 3.83 | 2479 | 33 | 94.6% |
| 13CEB320STA_scaffold_closed | 2769.7Kbp | 2769.7Kbp | 0.0K | 1.0K | 2769.7Kbp | 2.8Mbp | 38.0 | 29.15 | 3.42 | 2478 | 33 | 94.6% |
| 13CEB322STA_scaffold_closed | 1868.0Kbp | 901.9Kbp | 0.0K | 2.0K | 1868.0Kbp | 2.8Mbp | 41.0 | 705.76 | 33.25 | 2601 | 45 | 93.7% |
| 13CEB323STA_scaffold_closed | 2675.2Kbp | 2675.2Kbp | 0.0K | 1.0K | 2675.2Kbp | 2.7Mbp | 42.0 | 32.61 | 4.72 | 2671 | 26 | 96.4% |
| 13CEB324STA_scaffold_closed | 2724.5Kbp | 2724.5Kbp | 0.0K | 1.0K | 2724.5Kbp | 2.7Mbp | 55.0 | 696.15 | 31.21 | 2533 | 48 | 92.0% |
| 13CEB326STA_scaffold_closed | 2266.4Kbp | 2266.4Kbp | 0.0K | 1.0K | 2266.4Kbp | 2.7Mbp | 14.0 | 13.71 | 2.93 | 2628 | 34 | 98.0% |
| 13CEB327STA_scaffold_closed | 2817.9Kbp | 2817.9Kbp | 0.0K | 1.0K | 2817.9Kbp | 2.8Mbp | 51.0 | 134.56 | 8.12 | 2549 | 36 | 92.9% |
| 13CEB328STA_scaffold_closed | 2799.5Kbp | 2799.5Kbp | 0.0K | 1.0K | 2799.5Kbp | 2.8Mbp | 42.0 | 120.08 | 7.59 | 2518 | 34 | 92.1% |
| 13CEB329STA_scaffold_closed | 2743.4Kbp | 2743.4Kbp | 0.0K | 1.0K | 2743.4Kbp | 2.7Mbp | 35.0 | 36.37 | 3.71 | 2495 | 30 | 94.8% |
| 13CEB332STA_scaffold_closed | 2749.6Kbp | 2749.6Kbp | 0.0K | 1.0K | 2749.6Kbp | 2.8Mbp | 50.0 | 680.31 | 29.21 | 2318 | 40 | 92.6% |
| 13CEB412STA_scaffold_closed | 2725.6Kbp | 2725.6Kbp | 0.0K | 1.0K | 2725.6Kbp | 2.8Mbp | 47.0 | 695.96 | 32.46 | 2544 | 48 | 92.3% |
| 13CEB417STA_scaffold_closed | 2055.0Kbp | 672.5Kbp | 0.0K | 2.0K | 2055.0Kbp | 2.8Mbp | 47.0 | 685.37 | 32.33 | 2539 | 47 | 92.2% |
| 13CEB422STA_scaffold_closed | 2727.3Kbp | 2727.3Kbp | 0.0K | 1.0K | 2727.3Kbp | 2.8Mbp | 45.0 | 675.76 | 32.84 | 2539 | 48 | 92.3% |
| 13CEB427STA_scaffold_closed | 2727.1Kbp | 2727.1Kbp | 0.0K | 1.0K | 2727.1Kbp | 2.8Mbp | 47.0 | 692.11 | 33.10 | 2546 | 48 | 92.3% |
| 13CEB52STA_scaffold_closed | 2757.0Kbp | 2757.0Kbp | 0.0K | 1.0K | 2757.0Kbp | 2.8Mbp | 26.0 | 6.73 | 2.04 | 2751 | 29 | 97.4% |
| 14072_S5_scaffold_closed | 2790.9Kbp | 2790.9Kbp | 0.0K | 1.0K | 2790.9Kbp | 2.8Mbp | 34.0 | 46.31 | 5.12 | 2613 | 25 | 94.5% |
| 14079_S6_scaffold_closed | 2741.7Kbp | 2741.7Kbp | 0.0K | 1.0K | 2741.7Kbp | 2.8Mbp | 32.0 | 47.74 | 5.22 | 2616 | 25 | 95.5% |
| 14107_S7_scaffold_closed | 2722.7Kbp | 2722.7Kbp | 0.0K | 1.0K | 2722.7Kbp | 2.7Mbp | 35.0 | 299.31 | 12.74 | 2423 | 39 | 93.3% |
| 14128_S8_scaffold_closed | 2739.7Kbp | 2739.7Kbp | 0.0K | 1.0K | 2739.7Kbp | 2.9Mbp | 35.0 | 49.54 | 5.60 | 2612 | 25 | 95.3% |
| 14910_S9_scaffold_closed | 2760.7Kbp | 2760.7Kbp | 0.0K | 1.0K | 2760.7Kbp | 3.0Mbp | 50.0 | 64.00 | 5.77 | 2505 | 36 | 96.1% |
| 14A_scaffold_closed | 2723.1Kbp | 2723.1Kbp | 0.0K | 1.0K | 2723.1Kbp | 2.7Mbp | 63.0 | 2047.76 | 65.16 | 2313 | 54 | 82.4% |
| 14SBCL1004STA_scaffold_closed | 1692.7Kbp | 1026.0Kbp | 0.0K | 2.0K | 1692.7Kbp | 2.8Mbp | 106.0 | 58.21 | 17.30 | 2495 | 116 | 94.2% |
| 14SBCL1337STA_scaffold_closed | 1433.9Kbp | 1187.7Kbp | 0.0K | 2.0K | 1433.9Kbp | 2.8Mbp | 52.0 | 791.95 | 34.59 | 2272 | 45 | 91.0% |
| 14SBCL1338STA_scaffold_closed | 2092.6Kbp | 2092.6Kbp | 0.0K | 1.0K | 2092.6Kbp | 2.8Mbp | 52.0 | 778.12 | 34.31 | 2268 | 42 | 90.9% |
| 14SBCL1339STA_scaffold_closed | 1930.9Kbp | 827.1Kbp | 0.0K | 2.0K | 1930.9Kbp | 2.8Mbp | 54.0 | 779.75 | 34.35 | 2273 | 44 | 90.9% |
| 14SBCL1340STA_scaffold_closed | 2190.1Kbp | 2190.1Kbp | 0.0K | 1.0K | 2190.1Kbp | 2.8Mbp | 52.0 | 781.60 | 34.36 | 2271 | 44 | 91.0% |
| 14SBCL1343STA_scaffold_closed | 1763.4Kbp | 942.7Kbp | 0.0K | 2.0K | 1763.4Kbp | 2.7Mbp | 30.0 | 45.31 | 5.07 | 2515 | 28 | 95.3% |
| 14SBCL1344STA_scaffold_closed | 2352.5Kbp | 2352.5Kbp | 0.0K | 1.0K | 2352.5Kbp | 2.7Mbp | 28.0 | 45.09 | 3.80 | 2512 | 30 | 95.3% |
| 14SBCL1346STA_scaffold_closed | 2706.3Kbp | 2706.3Kbp | 0.0K | 1.0K | 2706.3Kbp | 2.7Mbp | 32.0 | 45.21 | 4.21 | 2514 | 29 | 95.2% |
| 14SBCL1347STA_scaffold_closed | 2706.4Kbp | 2706.4Kbp | 0.0K | 1.0K | 2706.4Kbp | 2.7Mbp | 27.0 | 47.15 | 5.67 | 2514 | 30 | 95.2% |
| 14SBCL1348STA_scaffold_closed | 2706.4Kbp | 2706.4Kbp | 0.0K | 1.0K | 2706.4Kbp | 2.7Mbp | 29.0 | 43.78 | 4.55 | 2514 | 31 | 95.3% |
| 14SBCL1349STA_scaffold_closed | 2707.2Kbp | 2707.2Kbp | 0.0K | 1.0K | 2707.2Kbp | 2.7Mbp | 33.0 | 45.17 | 5.15 | 2509 | 30 | 95.2% |
| 14SBCL1350STA_scaffold_closed | 2706.5Kbp | 2706.5Kbp | 0.0K | 1.0K | 2706.5Kbp | 2.7Mbp | 30.0 | 45.44 | 4.59 | 2513 | 28 | 95.2% |
| 14SBCL1351STA_scaffold_closed | 2707.8Kbp | 2707.8Kbp | 0.0K | 1.0K | 2707.8Kbp | 2.7Mbp | 35.0 | 46.18 | 4.10 | 2509 | 29 | 95.2% |
| 14SBCL1353STA_scaffold_closed | 2596.5Kbp | 2596.5Kbp | 0.0K | 1.0K | 2596.5Kbp | 2.6Mbp | 21.0 | 48.28 | 3.92 | 2295 | 25 | 88.3% |
| 14SBCL1357STA_scaffold_closed | 1648.3Kbp | 1159.0Kbp | 0.0K | 2.0K | 1648.3Kbp | 2.8Mbp | 31.0 | 52.39 | 5.56 | 2493 | 30 | 95.9% |
| 14SBCL765STA_scaffold_closed | 1773.4Kbp | 534.8Kbp | 0.0K | 2.0K | 1773.4Kbp | 2.8Mbp | 68.0 | 727.58 | 31.75 | 2504 | 65 | 90.6% |
| 14SBCL766STA_scaffold_closed | 2753.1Kbp | 2753.1Kbp | 0.0K | 1.0K | 2753.1Kbp | 2.8Mbp | 57.0 | 720.33 | 32.28 | 2497 | 60 | 90.5% |
| 14SBCL767STA_scaffold_closed | 2713.1Kbp | 2713.1Kbp | 0.0K | 1.0K | 2713.1Kbp | 2.7Mbp | 156.0 | 700.42 | 40.19 | 2403 | 130 | 89.6% |
| 14SBCL770STA_scaffold_closed | 2808.7Kbp | 2808.7Kbp | 0.0K | 1.0K | 2808.7Kbp | 2.8Mbp | 35.0 | 28.32 | 3.87 | 2672 | 24 | 96.1% |
| 14SBCL775STA_scaffold_closed | 2716.1Kbp | 2716.1Kbp | 0.0K | 1.0K | 2716.1Kbp | 2.7Mbp | 36.0 | 53.11 | 4.27 | 2486 | 27 | 94.8% |
| 14SBCL83STA_scaffold_closed | 2707.4Kbp | 2707.4Kbp | 0.0K | 1.0K | 2707.4Kbp | 2.7Mbp | 30.0 | 46.55 | 4.49 | 2506 | 28 | 96.2% |
| 14SBCL84STA_scaffold_closed | 1646.2Kbp | 1092.6Kbp | 0.0K | 2.0K | 1646.2Kbp | 2.7Mbp | 57.0 | 652.48 | 24.33 | 2494 | 49 | 91.8% |
| 14SBCL881STA_scaffold_closed | 2059.8Kbp | 2059.8Kbp | 0.0K | 1.0K | 2059.8Kbp | 2.7Mbp | 57.0 | 692.84 | 32.32 | 2460 | 49 | 91.3% |
| 14SBCL882STA_scaffold_closed | 2745.6Kbp | 2745.6Kbp | 0.0K | 1.0K | 2745.6Kbp | 2.7Mbp | 52.0 | 688.73 | 32.30 | 2543 | 48 | 92.1% |
| 14SBCL891STA_scaffold_closed | 2175.1Kbp | 2175.1Kbp | 0.0K | 1.0K | 2175.1Kbp | 2.7Mbp | 25.0 | 21.87 | 2.98 | 2522 | 23 | 95.4% |
| 14SBCL896STA_scaffold_closed | 2687.8Kbp | 2687.8Kbp | 0.0K | 1.0K | 2687.8Kbp | 2.7Mbp | 27.0 | 21.69 | 3.76 | 2517 | 26 | 95.3% |
| 14SBCL901STA_scaffold_closed | 2687.4Kbp | 2687.4Kbp | 0.0K | 1.0K | 2687.4Kbp | 2.7Mbp | 24.0 | 22.13 | 3.32 | 2519 | 24 | 95.3% |
| 14SBCL997STA_scaffold_closed | 2740.9Kbp | 2740.9Kbp | 0.0K | 1.0K | 2740.9Kbp | 2.8Mbp | 60.0 | 749.25 | 31.98 | 2388 | 53 | 92.6% |
| 15-1509KF_scaffold_closed | 2734.7Kbp | 2734.7Kbp | 0.0K | 1.0K | 2734.7Kbp | 2.7Mbp | 70.0 | 710.23 | 29.58 | 2566 | 52 | 93.7% |
| 15SBCL1201STA_scaffold_closed | 2790.0Kbp | 2790.0Kbp | 0.0K | 1.0K | 2790.0Kbp | 2.8Mbp | 29.0 | 46.78 | 6.67 | 2639 | 32 | 94.6% |
| 15SBCL1206STA_scaffold_closed | 2771.4Kbp | 2771.4Kbp | 0.0K | 1.0K | 2771.4Kbp | 2.8Mbp | 28.0 | 46.32 | 7.31 | 2636 | 32 | 94.6% |
| 15SBCL1211STA_scaffold_closed | 2222.3Kbp | 2222.3Kbp | 0.0K | 1.0K | 2222.3Kbp | 2.7Mbp | 51.0 | 698.27 | 29.64 | 2479 | 53 | 89.7% |
| 15SBCL1218STA_scaffold_closed | 2727.8Kbp | 2727.8Kbp | 0.0K | 1.0K | 2727.8Kbp | 2.7Mbp | 58.0 | 714.64 | 32.50 | 2495 | 52 | 90.5% |
| 15SBCL1220STA_scaffold_closed | 2666.5Kbp | 2666.5Kbp | 0.0K | 1.0K | 2666.5Kbp | 2.7Mbp | 53.0 | 700.44 | 29.40 | 2481 | 55 | 89.8% |
| 15SBCL1228STA_scaffold_closed | 3069.4Kbp | 3069.4Kbp | 0.0K | 1.0K | 3069.4Kbp | 3.1Mbp | 28.0 | 47.18 | 6.55 | 2640 | 30 | 94.7% |
| 15SBCL1251STA_scaffold_closed | 1669.5Kbp | 912.6Kbp | 0.0K | 2.0K | 1669.5Kbp | 2.8Mbp | 30.0 | 46.72 | 6.14 | 2635 | 31 | 94.6% |
| 15SBCL1261STA_scaffold_closed | 2018.1Kbp | 661.6Kbp | 0.0K | 2.0K | 2018.1Kbp | 2.7Mbp | 47.0 | 715.69 | 31.85 | 2483 | 35 | 90.0% |
| 15SBCL1262STA_scaffold_closed | 2772.5Kbp | 2772.5Kbp | 0.0K | 1.0K | 2772.5Kbp | 2.8Mbp | 25.0 | 45.38 | 6.29 | 2642 | 29 | 94.7% |
| 15SBCL1267STA_scaffold_closed | 2769.5Kbp | 2769.5Kbp | 0.0K | 1.0K | 2769.5Kbp | 2.8Mbp | 35.0 | 45.28 | 7.12 | 2638 | 32 | 94.6% |
| 15SBCL1292STA_scaffold_closed | 1451.2Kbp | 1268.0Kbp | 0.0K | 2.0K | 1451.2Kbp | 2.7Mbp | 50.0 | 753.26 | 29.84 | 2518 | 47 | 91.3% |
| 15SBCL1299STA_scaffold_closed | 2706.3Kbp | 2706.3Kbp | 0.0K | 1.0K | 2706.3Kbp | 2.8Mbp | 57.0 | 679.60 | 26.07 | 2499 | 50 | 92.1% |
| 15SBCL1314STA_scaffold_closed | 2791.0Kbp | 2791.0Kbp | 0.0K | 1.0K | 2791.0Kbp | 2.8Mbp | 41.0 | 36.74 | 4.55 | 2605 | 42 | 94.6% |
| 15SBCL1391STA_scaffold_closed | 2696.1Kbp | 2696.1Kbp | 0.0K | 1.0K | 2696.1Kbp | 2.7Mbp | 30.0 | 47.14 | 4.57 | 2501 | 31 | 96.1% |
| 15SBCL1397STA_scaffold_closed | 2704.3Kbp | 2704.3Kbp | 0.0K | 1.0K | 2704.3Kbp | 2.7Mbp | 50.0 | 737.95 | 29.36 | 2518 | 48 | 91.3% |
| 15SBCL1404STA_scaffold_closed | 2785.5Kbp | 2785.5Kbp | 0.0K | 1.0K | 2785.5Kbp | 2.8Mbp | 53.0 | 675.37 | 28.27 | 2307 | 45 | 92.4% |
| 15SBCL1409STA_scaffold_closed | 2710.7Kbp | 2710.7Kbp | 0.0K | 1.0K | 2710.7Kbp | 2.8Mbp | 50.0 | 741.60 | 29.62 | 2518 | 47 | 91.3% |
| 15SBCL1428STA_scaffold_closed | 1815.6Kbp | 892.1Kbp | 0.0K | 2.0K | 1815.6Kbp | 2.7Mbp | 46.0 | 748.69 | 29.96 | 2511 | 48 | 91.3% |
| 15SBCL1430STA_scaffold_closed | 2312.8Kbp | 2312.8Kbp | 0.0K | 1.0K | 2312.8Kbp | 2.7Mbp | 41.0 | 731.56 | 28.25 | 2520 | 46 | 91.2% |
| 15SBCL1434STA_scaffold_closed | 1612.8Kbp | 1288.1Kbp | 0.0K | 2.0K | 1612.8Kbp | 2.9Mbp | 46.0 | 297.79 | 13.01 | 2409 | 42 | 93.0% |
| 15SBCL1438STA_scaffold_closed | 2753.4Kbp | 2753.4Kbp | 0.0K | 1.0K | 2753.4Kbp | 2.8Mbp | 25.0 | 67.02 | 7.50 | 2600 | 31 | 98.2% |
| 15SBCL1506STA_scaffold_closed | 1821.8Kbp | 1026.5Kbp | 0.0K | 2.0K | 1821.8Kbp | 2.9Mbp | 43.0 | 93.73 | 6.67 | 2704 | 49 | 96.7% |
| 15SBCL1507STA_scaffold_closed | 2729.9Kbp | 2729.9Kbp | 0.0K | 1.0K | 2729.9Kbp | 2.7Mbp | 40.0 | 21.33 | 2.72 | 2514 | 29 | 95.2% |
| 15SBCL1509STA_scaffold_closed | 2230.5Kbp | 2230.5Kbp | 0.0K | 1.0K | 2230.5Kbp | 2.7Mbp | 69.0 | 712.03 | 28.82 | 2575 | 50 | 93.7% |
| 15SBCL1517STA_scaffold_closed | 2779.7Kbp | 2779.7Kbp | 0.0K | 1.0K | 2779.7Kbp | 2.8Mbp | 26.0 | 16.93 | 3.53 | 2585 | 30 | 95.9% |
| 15SBCL1520STA_scaffold_closed | 1835.1Kbp | 952.0Kbp | 0.0K | 2.0K | 1835.1Kbp | 2.8Mbp | 54.0 | 700.28 | 31.84 | 2580 | 52 | 93.0% |
| 15SBCL1527STA_scaffold_closed | 1796.2Kbp | 913.6Kbp | 0.0K | 2.0K | 1796.2Kbp | 2.7Mbp | 67.0 | 1408.90 | 53.92 | 2449 | 49 | 88.5% |
| 15SBCL1540STA_scaffold_closed | 2768.8Kbp | 2768.8Kbp | 0.0K | 1.0K | 2768.8Kbp | 2.8Mbp | 53.0 | 692.35 | 32.21 | 2580 | 50 | 93.0% |
| 15SBCL1548STA_scaffold_closed | 1818.6Kbp | 948.7Kbp | 0.0K | 2.0K | 1818.6Kbp | 2.8Mbp | 48.0 | 699.63 | 32.24 | 2578 | 52 | 93.0% |
| 15SBCL1550STA_scaffold_closed | 2707.7Kbp | 2707.7Kbp | 0.0K | 1.0K | 2707.7Kbp | 2.7Mbp | 31.0 | 24.45 | 3.47 | 2517 | 26 | 95.3% |
| 15SBCL1560STA_scaffold_closed | 2720.2Kbp | 2720.2Kbp | 0.0K | 1.0K | 2720.2Kbp | 2.7Mbp | 47.0 | 694.46 | 31.66 | 2541 | 48 | 91.9% |
| 15SBCL1565STA_scaffold_closed | 2721.6Kbp | 2721.6Kbp | 0.0K | 1.0K | 2721.6Kbp | 2.7Mbp | 44.0 | 676.22 | 31.50 | 2523 | 50 | 91.6% |
| 15SBCL1570STA_scaffold_closed | 2719.8Kbp | 2719.8Kbp | 0.0K | 1.0K | 2719.8Kbp | 2.7Mbp | 46.0 | 688.17 | 32.37 | 2536 | 52 | 91.9% |
| 15SBCL1571STA_scaffold_closed | 2721.5Kbp | 2721.5Kbp | 0.0K | 1.0K | 2721.5Kbp | 2.7Mbp | 53.0 | 691.06 | 31.24 | 2534 | 48 | 91.9% |
| 15SBCL1576STA_scaffold_closed | 2724.2Kbp | 2724.2Kbp | 0.0K | 1.0K | 2724.2Kbp | 2.7Mbp | 48.0 | 692.86 | 31.11 | 2541 | 47 | 91.9% |
| 16SBCL1007STA_scaffold_closed | 2857.8Kbp | 2857.8Kbp | 0.0K | 1.0K | 2857.8Kbp | 2.9Mbp | 36.0 | 39.21 | 5.16 | 2671 | 25 | 96.2% |
| 16SBCL1028STA_scaffold_closed | 2753.8Kbp | 2753.8Kbp | 0.0K | 1.0K | 2753.8Kbp | 2.8Mbp | 70.0 | 733.88 | 30.10 | 2573 | 54 | 93.7% |
| 16SBCL1033STA_scaffold_closed | 2752.5Kbp | 2752.5Kbp | 0.0K | 1.0K | 2752.5Kbp | 2.8Mbp | 71.0 | 703.43 | 29.66 | 2572 | 53 | 93.6% |
| 16SBCL1038STA_scaffold_closed | 2753.4Kbp | 2753.4Kbp | 0.0K | 1.0K | 2753.4Kbp | 2.8Mbp | 68.0 | 702.91 | 28.34 | 2574 | 49 | 93.6% |
| 16SBCL1043STA_scaffold_closed | 1871.9Kbp | 883.6Kbp | 0.0K | 2.0K | 1871.9Kbp | 2.8Mbp | 72.0 | 728.18 | 29.61 | 2571 | 54 | 93.6% |
| 16SBCL1068STA_scaffold_closed | 1811.5Kbp | 976.9Kbp | 0.0K | 2.0K | 1811.5Kbp | 2.8Mbp | 35.0 | 99.22 | 8.51 | 2688 | 41 | 96.2% |
| 16SBCL1169STA_scaffold_closed | 2124.2Kbp | 2124.2Kbp | 0.0K | 1.0K | 2124.2Kbp | 2.8Mbp | 28.0 | 97.55 | 8.22 | 2685 | 40 | 96.2% |
| 16SBCL1181STA_scaffold_closed | 1738.2Kbp | 787.3Kbp | 0.0K | 2.0K | 1738.2Kbp | 2.8Mbp | 27.0 | 64.85 | 7.14 | 2661 | 29 | 95.3% |
| 16SBCL1204STA_scaffold_closed | 1810.7Kbp | 548.5Kbp | 0.0K | 2.0K | 1810.7Kbp | 2.8Mbp | 50.0 | 791.14 | 36.65 | 2286 | 45 | 91.9% |
| 16SBCL1221STA_scaffold_closed | 2747.3Kbp | 2747.3Kbp | 0.0K | 1.0K | 2747.3Kbp | 2.7Mbp | 25.0 | 50.77 | 5.86 | 2646 | 24 | 94.9% |
| 16SBCL1248STA_scaffold_closed | 2166.3Kbp | 2166.3Kbp | 0.0K | 1.0K | 2166.3Kbp | 2.7Mbp | 42.0 | 56.60 | 6.31 | 2471 | 29 | 90.6% |
| 16SBCL1251STA_scaffold_closed | 2335.4Kbp | 2335.4Kbp | 0.0K | 1.0K | 2335.4Kbp | 2.7Mbp | 27.0 | 22.31 | 3.35 | 2519 | 24 | 95.4% |
| 16SBCL1284STA_scaffold_closed | 2865.9Kbp | 2865.9Kbp | 0.0K | 1.0K | 2865.9Kbp | 2.9Mbp | 48.0 | 147.09 | 7.96 | 2566 | 50 | 94.0% |
| 16SBCL1289STA_scaffold_closed | 2794.6Kbp | 2794.6Kbp | 0.0K | 1.0K | 2794.6Kbp | 2.8Mbp | 47.0 | 147.61 | 7.68 | 2593 | 39 | 94.2% |
| 16SBCL1291STA_scaffold_closed | 2789.0Kbp | 2789.0Kbp | 0.0K | 1.0K | 2789.0Kbp | 2.8Mbp | 45.0 | 794.64 | 36.76 | 2287 | 44 | 92.0% |
| 16SBCL1299STA_scaffold_closed | 2781.1Kbp | 2781.1Kbp | 0.0K | 1.0K | 2781.1Kbp | 2.8Mbp | 67.0 | 763.36 | 32.96 | 2507 | 52 | 90.1% |
| 16SBCL1533STA_scaffold_closed | 1572.8Kbp | 949.5Kbp | 0.0K | 2.0K | 1572.8Kbp | 2.8Mbp | 76.0 | 711.81 | 28.84 | 2566 | 57 | 93.6% |
| 16SBCL1572STA_scaffold_closed | 2769.1Kbp | 2769.1Kbp | 0.0K | 1.0K | 2769.1Kbp | 2.8Mbp | 33.0 | 51.29 | 5.13 | 2505 | 27 | 96.2% |
| 16SBCL1577STA_scaffold_closed | 2774.7Kbp | 2774.7Kbp | 0.0K | 1.0K | 2774.7Kbp | 2.8Mbp | 64.0 | 704.18 | 33.76 | 2559 | 56 | 92.8% |
| 16SBCL1645STA_scaffold_closed | 2730.5Kbp | 2730.5Kbp | 0.0K | 1.0K | 2730.5Kbp | 2.7Mbp | 26.0 | 44.75 | 4.90 | 2494 | 29 | 95.0% |
| 16SBCL1648STA_scaffold_closed | 2810.2Kbp | 2810.2Kbp | 0.0K | 1.0K | 2810.2Kbp | 2.8Mbp | 46.0 | 36.84 | 4.16 | 2455 | 29 | 93.8% |
| 16SBCL1650STA_scaffold_closed | 2743.5Kbp | 2743.5Kbp | 0.0K | 1.0K | 2743.5Kbp | 2.7Mbp | 77.0 | 721.07 | 30.28 | 2559 | 64 | 93.5% |
| 16SBCL233STA_scaffold_closed | 2783.0Kbp | 2783.0Kbp | 0.0K | 1.0K | 2783.0Kbp | 2.8Mbp | 48.0 | 131.17 | 8.07 | 2525 | 35 | 92.2% |
| 16SBCL234STA_scaffold_closed | 2783.6Kbp | 2783.6Kbp | 0.0K | 1.0K | 2783.6Kbp | 2.8Mbp | 54.0 | 134.78 | 8.26 | 2520 | 38 | 92.2% |
| 16SBCL246STA_scaffold_closed | 2683.7Kbp | 2683.7Kbp | 0.0K | 1.0K | 2683.7Kbp | 2.7Mbp | 140.0 | 704.54 | 44.26 | 2467 | 123 | 92.4% |
| 16SBCL247STA_scaffold_closed | 2275.2Kbp | 2275.2Kbp | 0.0K | 1.0K | 2275.2Kbp | 2.8Mbp | 32.0 | 31.05 | 4.63 | 2608 | 26 | 94.4% |
| 16SBCL259STA_scaffold_closed | 2386.8Kbp | 2386.8Kbp | 0.0K | 1.0K | 2386.8Kbp | 2.8Mbp | 55.0 | 767.69 | 32.81 | 2376 | 45 | 92.1% |
| 16SBCL260STA_scaffold_closed | 2737.2Kbp | 2737.2Kbp | 0.0K | 1.0K | 2737.2Kbp | 2.8Mbp | 54.0 | 765.26 | 32.25 | 2381 | 44 | 92.2% |
| 16SBCL266STA_scaffold_closed | 2340.3Kbp | 2340.3Kbp | 0.0K | 1.0K | 2340.3Kbp | 2.8Mbp | 56.0 | 768.43 | 32.59 | 2380 | 42 | 92.1% |
| 16SBCL276STA_scaffold_closed | 2796.6Kbp | 2796.6Kbp | 0.0K | 1.0K | 2796.6Kbp | 2.8Mbp | 35.0 | 37.47 | 3.48 | 2452 | 27 | 93.9% |
| 16SBCL279STA_scaffold_closed | 1875.5Kbp | 755.7Kbp | 0.0K | 2.0K | 1875.5Kbp | 2.8Mbp | 117.0 | 24.75 | 4.29 | 2434 | 110 | 95.3% |
| 16SBCL285STA_scaffold_closed | 2730.8Kbp | 2730.8Kbp | 0.0K | 1.0K | 2730.8Kbp | 2.7Mbp | 50.0 | 696.42 | 32.50 | 2538 | 48 | 92.1% |
| 16SBCL291STA_scaffold_closed | 2784.2Kbp | 2784.2Kbp | 0.0K | 1.0K | 2784.2Kbp | 2.8Mbp | 52.0 | 132.75 | 9.42 | 2516 | 44 | 92.2% |
| 16SBCL38STA_scaffold_closed | 2754.0Kbp | 2754.0Kbp | 0.0K | 1.0K | 2754.0Kbp | 2.8Mbp | 73.0 | 731.45 | 30.14 | 2559 | 57 | 93.6% |
| 16SBCL443STA_scaffold_closed | 2783.9Kbp | 2783.9Kbp | 0.0K | 1.0K | 2783.9Kbp | 2.8Mbp | 52.0 | 704.28 | 30.95 | 2588 | 52 | 93.2% |
| 16SBCL448STA_scaffold_closed | 2764.9Kbp | 2764.9Kbp | 0.0K | 1.0K | 2764.9Kbp | 2.8Mbp | 47.0 | 702.84 | 32.57 | 2586 | 49 | 93.3% |
| 16SBCL677STA_scaffold_closed | 2759.7Kbp | 2759.7Kbp | 0.0K | 1.0K | 2759.7Kbp | 2.8Mbp | 0.0 | 3185.03 | 134.44 | 115 | 10 | 2.9% |
| 16SBCL81STA_scaffold_closed | 2238.5Kbp | 2238.5Kbp | 0.0K | 1.0K | 2238.5Kbp | 2.7Mbp | 45.0 | 734.26 | 28.65 | 2412 | 39 | 91.9% |
| 16SBCL840STA_scaffold_closed | 2705.2Kbp | 2705.2Kbp | 0.0K | 1.0K | 2705.2Kbp | 2.7Mbp | 49.0 | 718.24 | 32.09 | 2529 | 52 | 92.0% |
| 16SBCL841STA_scaffold_closed | 2399.3Kbp | 2399.3Kbp | 0.0K | 1.0K | 2399.3Kbp | 2.8Mbp | 42.0 | 55.59 | 6.08 | 2507 | 25 | 96.0% |
| 16SBCL899STA_scaffold_closed | 2996.9Kbp | 2996.9Kbp | 0.0K | 1.0K | 2996.9Kbp | 3.0Mbp | 39.0 | 43.56 | 6.22 | 2576 | 26 | 94.2% |
| 16SBCL901STA_scaffold_closed | 2755.4Kbp | 2755.4Kbp | 0.0K | 1.0K | 2755.4Kbp | 2.8Mbp | 66.0 | 723.13 | 27.73 | 2409 | 54 | 91.3% |
| 17-09KF_scaffold | 3107.1Kbp | 3107.1Kbp | 0.0K | 1.0K | 3107.1Kbp | 3.5Mbp | 424.0 | 147.41 | 17.68 | 1991 | 496 | 93.4% |
| 17SBCL03STA_scaffold_closed | 2768.1Kbp | 2768.1Kbp | 0.0K | 1.0K | 2768.1Kbp | 2.8Mbp | 38.0 | 45.88 | 5.00 | 2561 | 31 | 97.2% |
| 17SBCL07STA_scaffold_closed | 2019.7Kbp | 706.4Kbp | 0.0K | 2.0K | 2019.7Kbp | 2.8Mbp | 36.0 | 46.07 | 5.41 | 2560 | 30 | 97.2% |
| 17SBCL08STA_scaffold_closed | 2779.4Kbp | 2779.4Kbp | 0.0K | 1.0K | 2779.4Kbp | 2.8Mbp | 36.0 | 39.89 | 3.94 | 2454 | 32 | 93.9% |
| 17SBCL09STA_scaffold_closed | 2794.1Kbp | 2794.1Kbp | 0.0K | 1.0K | 2794.1Kbp | 2.8Mbp | 41.0 | 38.17 | 4.39 | 2456 | 28 | 93.8% |
| 17SBCL13STA_scaffold_closed | 1013.8Kbp | 1013.8Kbp | 0.0K | 2.0K | 1519.7Kbp | 3.3Mbp | 222.0 | 372.06 | 25.21 | 2264 | 252 | 94.3% |
| 17SBCL18STA_scaffold_closed | 2704.1Kbp | 2704.1Kbp | 0.0K | 1.0K | 2704.1Kbp | 2.7Mbp | 33.0 | 44.27 | 9.99 | 2491 | 45 | 95.1% |
| 17SBCL202STA_scaffold_closed | 2690.5Kbp | 2690.5Kbp | 0.0K | 1.0K | 2690.5Kbp | 2.7Mbp | 58.0 | 661.28 | 25.01 | 2489 | 52 | 91.8% |
| 17SBCL208STA_scaffold_closed | 1701.7Kbp | 948.9Kbp | 0.0K | 2.0K | 1701.7Kbp | 2.7Mbp | 63.0 | 684.89 | 25.50 | 2453 | 53 | 90.6% |
| 17SBCL214STA_scaffold_closed | 1945.4Kbp | 589.0Kbp | 0.0K | 2.0K | 1945.4Kbp | 2.7Mbp | 58.0 | 660.19 | 24.14 | 2498 | 52 | 92.0% |
| 17SBCL220STA_scaffold_closed | 1679.0Kbp | 791.3Kbp | 0.0K | 2.0K | 1679.0Kbp | 2.7Mbp | 60.0 | 676.12 | 24.75 | 2486 | 50 | 91.9% |
| 17SBCL223STA_scaffold_closed | 2325.5Kbp | 2325.5Kbp | 0.0K | 1.0K | 2325.5Kbp | 2.7Mbp | 28.0 | 49.54 | 4.69 | 2500 | 31 | 96.1% |
| 17SBCL225STA_scaffold_closed | 2124.8Kbp | 2124.8Kbp | 0.0K | 1.0K | 2124.8Kbp | 2.7Mbp | 50.0 | 662.68 | 24.99 | 2495 | 50 | 91.9% |
| 17SBCL25STA_scaffold_closed | 2162.2Kbp | 2162.2Kbp | 0.0K | 1.0K | 2162.2Kbp | 2.7Mbp | 0.0 | 3111.64 | 128.72 | 149 | 18 | 4.1% |
| 17SBCL532STA_scaffold_closed | 2768.8Kbp | 2768.8Kbp | 0.0K | 1.0K | 2768.8Kbp | 2.8Mbp | 54.0 | 718.64 | 31.78 | 2567 | 53 | 93.1% |
| 17SBCL533STA_scaffold_closed | 2770.8Kbp | 2770.8Kbp | 0.0K | 1.0K | 2770.8Kbp | 2.8Mbp | 52.0 | 720.10 | 32.53 | 2574 | 52 | 93.3% |
| 17SBCL580STA_scaffold_closed | 1915.5Kbp | 865.1Kbp | 0.0K | 2.0K | 1915.5Kbp | 2.8Mbp | 28.0 | 65.53 | 4.42 | 2601 | 32 | 96.3% |
| 17SBCL585STA_scaffold_closed | 2782.6Kbp | 2782.6Kbp | 0.0K | 1.0K | 2782.6Kbp | 2.8Mbp | 28.0 | 67.04 | 4.63 | 2603 | 31 | 96.4% |
| 17SBCL586STA_scaffold_closed | 2781.1Kbp | 2781.1Kbp | 0.0K | 1.0K | 2781.1Kbp | 2.8Mbp | 28.0 | 65.20 | 5.48 | 2605 | 32 | 96.3% |
| 17SBCL718STA_scaffold_closed | 2004.7Kbp | 749.9Kbp | 0.0K | 2.0K | 2004.7Kbp | 2.8Mbp | 41.0 | 24.53 | 3.20 | 2512 | 36 | 95.4% |
| 17SBCL778STA_scaffold_closed | 2696.6Kbp | 2696.6Kbp | 0.0K | 1.0K | 2696.6Kbp | 2.7Mbp | 31.0 | 49.19 | 5.85 | 2500 | 32 | 96.1% |
| 18SBCL287STA_scaffold_closed | 2770.4Kbp | 2770.4Kbp | 0.0K | 1.0K | 2770.4Kbp | 2.8Mbp | 55.0 | 693.49 | 30.39 | 2534 | 53 | 92.2% |
| 18SBCL369STA_scaffold_closed | 2092.1Kbp | 2092.1Kbp | 0.0K | 1.0K | 2092.1Kbp | 2.7Mbp | 71.0 | 1026.83 | 41.56 | 2361 | 57 | 89.0% |
| 18SBCL52STA_scaffold_closed | 2107.2Kbp | 712.0Kbp | 0.0K | 2.0K | 2107.2Kbp | 2.8Mbp | 57.0 | 823.91 | 34.49 | 2302 | 45 | 92.4% |
| 18SBCL58STA_scaffold_closed | 2645.6Kbp | 2645.6Kbp | 0.0K | 1.0K | 2645.6Kbp | 2.7Mbp | 53.0 | 720.69 | 26.60 | 2359 | 42 | 91.4% |
| 18SBCL598STA_scaffold_closed | 2756.8Kbp | 2756.8Kbp | 0.0K | 1.0K | 2756.8Kbp | 2.8Mbp | 29.0 | 46.96 | 6.74 | 2655 | 31 | 95.2% |
| 18SBCL59STA_scaffold_closed | 2761.9Kbp | 2761.9Kbp | 0.0K | 1.0K | 2761.9Kbp | 2.8Mbp | 48.0 | 704.11 | 33.43 | 2556 | 43 | 92.5% |
| 18SBCL601STA_scaffold_closed | 2718.4Kbp | 2718.4Kbp | 0.0K | 1.0K | 2718.4Kbp | 2.7Mbp | 49.0 | 710.78 | 32.95 | 2484 | 45 | 91.9% |
| 18SBCL64STA_scaffold_closed | 2208.6Kbp | 2208.6Kbp | 0.0K | 1.0K | 2208.6Kbp | 2.7Mbp | 50.0 | 723.84 | 26.76 | 2359 | 42 | 91.4% |
| 18SBCL65STA_scaffold_closed | 2781.5Kbp | 2781.5Kbp | 0.0K | 1.0K | 2781.5Kbp | 2.8Mbp | 51.0 | 688.98 | 30.50 | 2539 | 45 | 91.9% |
| 18SBCL667STA_scaffold_closed | 2696.9Kbp | 2696.9Kbp | 0.0K | 1.0K | 2696.9Kbp | 2.7Mbp | 60.0 | 664.28 | 25.01 | 2487 | 46 | 92.0% |
| 18SBCL668STA_scaffold_closed | 2698.1Kbp | 2698.1Kbp | 0.0K | 1.0K | 2698.1Kbp | 2.7Mbp | 22.0 | 68.72 | 6.67 | 2594 | 19 | 97.8% |
| 18SBCL669STA_scaffold_closed | 2739.6Kbp | 2739.6Kbp | 0.0K | 1.0K | 2739.6Kbp | 2.8Mbp | 54.0 | 861.12 | 38.80 | 2263 | 44 | 91.0% |
| 18SBCL670STA_scaffold_closed | 2741.5Kbp | 2741.5Kbp | 0.0K | 1.0K | 2741.5Kbp | 2.8Mbp | 34.0 | 58.73 | 7.73 | 2590 | 26 | 98.2% |
| 18SBCL671STA_scaffold_closed | 2805.8Kbp | 2805.8Kbp | 0.0K | 1.0K | 2805.8Kbp | 2.9Mbp | 35.0 | 73.81 | 5.50 | 2617 | 32 | 95.2% |
| 18SBCL672STA_scaffold_closed | 2737.2Kbp | 2737.2Kbp | 0.0K | 1.0K | 2737.2Kbp | 2.8Mbp | 57.0 | 690.23 | 32.93 | 2395 | 51 | 92.0% |
| 18SBCL673STA_scaffold_closed | 2751.1Kbp | 2751.1Kbp | 0.0K | 1.0K | 2751.1Kbp | 2.8Mbp | 71.0 | 1769.47 | 55.83 | 2281 | 54 | 84.8% |
| 18SBCL674STA_scaffold_closed | 2748.7Kbp | 2748.7Kbp | 0.0K | 1.0K | 2748.7Kbp | 2.8Mbp | 69.0 | 1796.64 | 57.73 | 2293 | 52 | 85.2% |
| 18SBCL675STA_scaffold_closed | 2829.7Kbp | 2829.7Kbp | 0.0K | 1.0K | 2829.7Kbp | 2.9Mbp | 49.0 | 60.44 | 6.29 | 2582 | 31 | 94.3% |
| 18SBCL676STA_scaffold_closed | 2720.0Kbp | 2720.0Kbp | 0.0K | 1.0K | 2720.0Kbp | 2.8Mbp | 69.0 | 1759.79 | 55.74 | 2298 | 55 | 85.0% |
| 18SBCL677STA_scaffold_closed | 2723.1Kbp | 2723.1Kbp | 0.0K | 1.0K | 2723.1Kbp | 2.8Mbp | 70.0 | 1763.45 | 55.94 | 2298 | 55 | 85.0% |
| 18SBCL678STA_scaffold_closed | 2912.5Kbp | 2912.5Kbp | 0.0K | 1.0K | 2912.5Kbp | 3.0Mbp | 62.0 | 131.02 | 9.17 | 2527 | 38 | 92.4% |
| 18SBCL679STA_scaffold_closed | 2719.6Kbp | 2719.6Kbp | 0.0K | 1.0K | 2719.6Kbp | 2.8Mbp | 52.0 | 691.82 | 29.78 | 2376 | 40 | 92.0% |
| 18SBCL680STA_scaffold_closed | 2691.6Kbp | 2691.6Kbp | 0.0K | 1.0K | 2691.6Kbp | 2.7Mbp | 58.0 | 680.34 | 24.51 | 2488 | 45 | 91.8% |
| 18SBCL850STA_scaffold_closed | 2757.3Kbp | 2757.3Kbp | 0.0K | 1.0K | 2757.3Kbp | 2.8Mbp | 45.0 | 720.52 | 28.69 | 2408 | 42 | 91.2% |
| 18SBCL855STA_scaffold_closed | 2389.8Kbp | 2389.8Kbp | 0.0K | 1.0K | 2389.8Kbp | 2.8Mbp | 31.0 | 26.84 | 2.68 | 2519 | 27 | 95.4% |
| 18SBCL858STA_scaffold_closed | 2391.5Kbp | 2391.5Kbp | 0.0K | 1.0K | 2391.5Kbp | 2.8Mbp | 32.0 | 25.35 | 2.61 | 2519 | 27 | 95.5% |
| 18SBCL882STA_scaffold_closed | 2750.9Kbp | 2750.9Kbp | 0.0K | 1.0K | 2750.9Kbp | 2.8Mbp | 53.0 | 698.14 | 32.23 | 2540 | 47 | 91.7% |
| 18SBCL887STA_scaffold_closed | 2715.6Kbp | 2715.6Kbp | 0.0K | 1.0K | 2715.6Kbp | 2.7Mbp | 46.0 | 696.47 | 31.97 | 2534 | 51 | 91.7% |
| 18SBCL888STA_scaffold_closed | 1898.4Kbp | 818.0Kbp | 0.0K | 2.0K | 1898.4Kbp | 2.7Mbp | 51.0 | 689.07 | 31.92 | 2539 | 47 | 91.7% |
| 18SBCL893STA_scaffold_closed | 2716.9Kbp | 2716.9Kbp | 0.0K | 1.0K | 2716.9Kbp | 2.7Mbp | 54.0 | 677.86 | 31.48 | 2529 | 48 | 91.6% |
| 18SBCL903STA_scaffold_closed | 2714.2Kbp | 2714.2Kbp | 0.0K | 1.0K | 2714.2Kbp | 2.7Mbp | 50.0 | 688.80 | 31.62 | 2540 | 48 | 91.7% |
| 18SBCL908STA_scaffold_closed | 2760.0Kbp | 2760.0Kbp | 0.0K | 1.0K | 2760.0Kbp | 2.8Mbp | 55.0 | 690.61 | 31.75 | 2529 | 48 | 91.6% |
| 18SBCL913STA_scaffold_closed | 2715.3Kbp | 2715.3Kbp | 0.0K | 1.0K | 2715.3Kbp | 2.7Mbp | 52.0 | 690.97 | 30.55 | 2528 | 50 | 91.4% |
| 18SBCL914STA_scaffold_closed | 2715.5Kbp | 2715.5Kbp | 0.0K | 1.0K | 2715.5Kbp | 2.7Mbp | 47.0 | 685.60 | 31.70 | 2537 | 48 | 91.7% |
| 18SBCL919STA_scaffold_closed | 1898.9Kbp | 817.8Kbp | 0.0K | 2.0K | 1898.9Kbp | 2.7Mbp | 46.0 | 691.42 | 33.00 | 2537 | 48 | 91.7% |
| 18SBCL920STA_scaffold_closed | 2717.3Kbp | 2717.3Kbp | 0.0K | 1.0K | 2717.3Kbp | 2.7Mbp | 55.0 | 698.16 | 31.82 | 2536 | 49 | 91.7% |
| 18SBCL921STA_scaffold_closed | 2718.2Kbp | 2718.2Kbp | 0.0K | 1.0K | 2718.2Kbp | 2.7Mbp | 53.0 | 694.16 | 31.59 | 2535 | 52 | 91.7% |
| 18SBCL922STA_scaffold_closed | 1385.9Kbp | 939.5Kbp | 0.0K | 2.0K | 1385.9Kbp | 2.7Mbp | 53.0 | 691.18 | 31.78 | 2527 | 60 | 91.7% |
| 18SBCL923STA_scaffold_closed | 2676.8Kbp | 2676.8Kbp | 0.0K | 1.0K | 2676.8Kbp | 2.7Mbp | 54.0 | 692.40 | 31.59 | 2503 | 46 | 90.4% |
| 18SBCL924STA_scaffold_closed | 2714.8Kbp | 2714.8Kbp | 0.0K | 1.0K | 2714.8Kbp | 2.7Mbp | 50.0 | 686.58 | 31.82 | 2536 | 49 | 91.7% |
| 18SBCL925STA_scaffold_closed | 2717.9Kbp | 2717.9Kbp | 0.0K | 1.0K | 2717.9Kbp | 2.7Mbp | 50.0 | 686.99 | 30.82 | 2538 | 48 | 91.7% |
| 1A_scaffold_closed | 2688.2Kbp | 2688.2Kbp | 0.0K | 1.0K | 2688.2Kbp | 2.7Mbp | 27.0 | 16.51 | 2.16 | 2518 | 24 | 95.3% |
| 28306_S10_scaffold_closed | 2720.6Kbp | 2720.6Kbp | 0.0K | 1.0K | 2720.6Kbp | 2.7Mbp | 33.0 | 47.99 | 4.76 | 2606 | 25 | 94.9% |
| 294E_scaffold_closed | 2123.5Kbp | 2123.5Kbp | 0.0K | 1.0K | 2123.5Kbp | 2.8Mbp | 36.0 | 77.36 | 5.62 | 2698 | 40 | 96.5% |
| 333E_scaffold_closed | 2781.2Kbp | 2781.2Kbp | 0.0K | 1.0K | 2781.2Kbp | 2.8Mbp | 39.0 | 39.84 | 4.46 | 2491 | 36 | 96.1% |
| 367F_scaffold_closed | 2687.0Kbp | 2687.0Kbp | 0.0K | 1.0K | 2687.0Kbp | 2.7Mbp | 29.0 | 19.03 | 2.84 | 2515 | 27 | 95.2% |
| 36A_scaffold_closed | 2078.0Kbp | 2078.0Kbp | 0.0K | 1.0K | 2078.0Kbp | 2.7Mbp | 41.0 | 671.54 | 31.23 | 2565 | 45 | 92.7% |
| 388F_scaffold_closed | 2700.9Kbp | 2700.9Kbp | 0.0K | 1.0K | 2700.9Kbp | 2.7Mbp | 37.0 | 64.89 | 6.80 | 2648 | 38 | 94.3% |
| 42719_1_S7_scaffold_closed | 2790.5Kbp | 2790.5Kbp | 0.0K | 1.0K | 2790.5Kbp | 2.8Mbp | 50.0 | 705.99 | 31.35 | 2340 | 52 | 93.7% |
| 42719_2_S8_scaffold_closed | 2796.8Kbp | 2796.8Kbp | 0.0K | 1.0K | 2796.8Kbp | 2.8Mbp | 49.0 | 711.90 | 31.99 | 2341 | 51 | 93.7% |
| 42719_3_S9_scaffold_closed | 2788.1Kbp | 2788.1Kbp | 0.0K | 1.0K | 2788.1Kbp | 2.8Mbp | 46.0 | 712.66 | 32.62 | 2343 | 49 | 93.7% |
| 42719_4_S10_scaffold_closed | 2790.5Kbp | 2790.5Kbp | 0.0K | 1.0K | 2790.5Kbp | 2.8Mbp | 46.0 | 709.84 | 31.93 | 2340 | 53 | 93.7% |
| 42719_5_S11_scaffold_closed | 2812.1Kbp | 2812.1Kbp | 0.0K | 1.0K | 2812.1Kbp | 2.8Mbp | 48.0 | 706.95 | 32.03 | 2332 | 49 | 93.5% |
| 42A_scaffold_closed | 2338.3Kbp | 2338.3Kbp | 0.0K | 1.0K | 2338.3Kbp | 2.7Mbp | 41.0 | 40.80 | 6.65 | 2643 | 34 | 94.9% |
| 43113_S11_scaffold_closed | 2752.2Kbp | 2752.2Kbp | 0.0K | 1.0K | 2752.2Kbp | 2.8Mbp | 35.0 | 42.09 | 3.59 | 2508 | 25 | 95.0% |
| 43A_scaffold_closed | 2216.6Kbp | 2216.6Kbp | 0.0K | 1.0K | 2216.6Kbp | 2.8Mbp | 79.0 | 1841.56 | 63.23 | 2399 | 67 | 86.4% |
| 44A_scaffold_closed | 2712.8Kbp | 2712.8Kbp | 0.0K | 1.0K | 2712.8Kbp | 2.7Mbp | 52.0 | 657.67 | 29.46 | 2562 | 48 | 93.0% |
| 45A_scaffold_closed | 2320.9Kbp | 2320.9Kbp | 0.0K | 1.0K | 2320.9Kbp | 2.7Mbp | 37.0 | 55.08 | 5.32 | 2598 | 34 | 95.0% |
| 46AKF_scaffold_closed | 2688.6Kbp | 2688.6Kbp | 0.0K | 1.0K | 2688.6Kbp | 2.7Mbp | 73.0 | 1807.86 | 61.34 | 2263 | 55 | 84.8% |
| 46A_scaffold_closed | 2704.3Kbp | 2704.3Kbp | 0.0K | 1.0K | 2704.3Kbp | 2.7Mbp | 63.0 | 2026.65 | 66.68 | 2287 | 69 | 82.1% |
| 47A_scaffold_closed | 2746.6Kbp | 2746.6Kbp | 0.0K | 1.0K | 2746.6Kbp | 2.8Mbp | 25.0 | 51.57 | 5.54 | 2619 | 30 | 95.7% |
| 82862_S4_scaffold_closed | 2784.8Kbp | 2784.8Kbp | 0.0K | 1.0K | 2784.8Kbp | 2.8Mbp | 40.0 | 45.67 | 5.48 | 2614 | 28 | 95.4% |
Number of Contigs
This plot shows the number of contigs found for each assembly, broken down by length.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Bowtie 2
Bowtie 2 is an ultrafast and memory-efficient tool for aligning sequencing reads to long reference sequences.
This plot shows the number of reads aligning to the reference in different ways.
There are 3 possible types of alignment: SE Mapped uniquely: Read has only one occurence in the reference genome. SE Multimapped: Read has multiple occurence. * SE No aligned: Read has no occurence.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Trimmomatic
Trimmomatic is a flexible read trimming tool for Illumina NGS data.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
FastQC
FastQC is a quality control tool for high throughput sequence data, written by Simon Andrews at the Babraham Institute in Cambridge.
Sequence Quality Histograms
The mean quality value across each base position in the read. See the FastQC help.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Per Sequence Quality Scores
The number of reads with average quality scores. Shows if a subset of reads has poor quality. See the FastQC help.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Per Base Sequence Content
The proportion of each base position for which each of the four normal DNA bases has been called. See the FastQC help.
Click a sample row to see a line plot for that dataset.
Rollover for sample name
Position: -
%T: -
%C: -
%A: -
%G: -
Per Sequence GC Content
The average GC content of reads. Normal random library typically have a roughly normal distribution of GC content. See the FastQC help.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Per Base N Content
The percentage of base calls at each position for which an N was called. See the FastQC help.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Sequence Length Distribution
The distribution of fragment sizes (read lengths) found. See the FastQC help.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Sequence Duplication Levels
The relative level of duplication found for every sequence. See the FastQC help.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
Overrepresented sequences
The total amount of overrepresented sequences found in each library. See the FastQC help for further information.
622 samples had less than 1% of reads made up of overrepresented sequences
Adapter Content
The cumulative percentage count of the proportion of your library which has seen each of the adapter sequences at each position. See the FastQC help. Only samples with ≥ 0.1% adapter contamination are shown.
Flat image plot. Toolbox functions such as highlighting / hiding samples will not work (see the docs).
